CDS
| Accession Number | TCMCG057C50687 |
| gbkey | CDS |
| Protein Id | XP_018452221.1 |
| Location | complement(join(29532773..29533195,29533310..29533411,29533481..29533609,29533706..29533837,29533923..29534023,29534114..29534300,29534394..29534537,29534637..29534705,29534797..29534886,29535047..29535229,29535312..29535344)) |
| Gene | LOC108823498 |
| GeneID | 108823498 |
| Organism | Raphanus sativus |
Protein
| Length | 530aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018596719.1 |
| Definition | PREDICTED: small RNA degrading nuclease 3-like [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | small RNA degrading nuclease |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14570
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0016592 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044451 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGAGCATAAACTAGCCACTGCTGAGAAGAAGGTGCTAGTGGAGCTGGTGAAGCTAGTGCAGAAGCAAGGTTTAGAAGGCGACAACGGAGGATGGAAAGAGTTTCTAAACTCTTATGATAAGAGATTAGGATCGTCTCTCAGCGATCCTTCGAGACGCTCCAATGATGTATTGGTCGCTTTTCTTTCCTCTTTCAAAAAGAAGGAAGATGTCCAGCTATTGGCTAGGGTTCTTCAGTGTGATGCTAATCGTAACTTGATTGAGAAGTTCAAGCAAGAATCTCCTGATAAAGAGACTCCTGAGCAGAGGCTAGTTCGAATGACTATTACTCATCCTAGGTACCCAATCTACTATGCTTTCCCTTCCCACGCCGAGGATTGGTTTGTAACTAAGAGTGGCAATAAGCAGTCAAAAGTGATCAAGTCAACCAGAATGCTTGCTATTGATTGTGAGATGGTTACCTGTGACGATGGCAGTGAAGCTGTTGTCAGGGTTGGCGCTGTCGACCGTGATTTAAAGGTGGTTCTTGACAAATTTGTGAAACCGAGCCTACCGGTTGTTGACTATAAGACTGAGATTACTGGAGTTACTGCTGAGGATCTTGAAAAAGCCACTCTCTCTGTTGCTGATATTCAGAAAAAACTCCGGAGGTTTCTTTCTAAGGGAACTATTTTAGTTGGTCACGGTTTGCACAATGATCTTCAAGTGTTGAAGGTAGATCATGCCAGAGTCATCGATACTTCCCTTGTATTCAAGTATTCCGGTGCAAACAATTCTCGAATACCTTCTTTGTTAAACCTATGCAAGTCTGTTTTGGATGAAGAACTGAGAATGGAGGGTGCTGCCCACAATTGCGTTCACGACGCTGCCGCTGCTATGAAGCTTGTGCTTGCTGTTGTGGAGAGAGGAGTAGAGACTTTGATTCCACAAACCGAACAAATGTTGGAGGTTGAGAAGACAATACATGAGGCTAAGAAGGCAAGTCTCTATCTTCATAAGATACCTCACAATGTTCCCTCTCAAGAGTTACGAGGAGTTATTACGGGAGATTTCAAAGTCGACGTTAAGCCACCAAAGAAGCTAGGAGGTTATTATAGCGCAGAAGTTGTTTTTAGTAGTCAAGAGGAAGCAAATGAAGCATTTGAAAAAGTTGATGGAGATATAGTTAAGGATACAATGGGTTTGTCACAGAAAATGGTTCAGTTTAAGTTGAATTCTGGATCAGTATCTAGACTGTACGTTCGTAAAAATGTTCAAGACGGTGAAGAAGTCTCTGCGAAGAAGAGAAGTAACACAGAGGAGGAGAAGAACGTGAGTTGTAAGAGACAGAAGAGGGAGAATGATTCTGAGGAGACGACTAGGGAAGAGAATGGCAGCAGCCAAGGGAGCATATGTGAAGATCACATAAAGGAAATTGAAGAACTGAAGGAGAAACTCAAAACGACGGTTGAGGAAAATGAAGAACTGAAGGAGAAACTAAAAGCTAAGGATGAAAATGAAGAACTGAAGGAGAAACTAAAAGCTAAGGAACGTGAGGTTGAGGCTCAGGATAAGATGATAACTAACCTCAAAAAGAAACTGAAGAAAAAGTGA |
| Protein: MEHKLATAEKKVLVELVKLVQKQGLEGDNGGWKEFLNSYDKRLGSSLSDPSRRSNDVLVAFLSSFKKKEDVQLLARVLQCDANRNLIEKFKQESPDKETPEQRLVRMTITHPRYPIYYAFPSHAEDWFVTKSGNKQSKVIKSTRMLAIDCEMVTCDDGSEAVVRVGAVDRDLKVVLDKFVKPSLPVVDYKTEITGVTAEDLEKATLSVADIQKKLRRFLSKGTILVGHGLHNDLQVLKVDHARVIDTSLVFKYSGANNSRIPSLLNLCKSVLDEELRMEGAAHNCVHDAAAAMKLVLAVVERGVETLIPQTEQMLEVEKTIHEAKKASLYLHKIPHNVPSQELRGVITGDFKVDVKPPKKLGGYYSAEVVFSSQEEANEAFEKVDGDIVKDTMGLSQKMVQFKLNSGSVSRLYVRKNVQDGEEVSAKKRSNTEEEKNVSCKRQKRENDSEETTREENGSSQGSICEDHIKEIEELKEKLKTTVEENEELKEKLKAKDENEELKEKLKAKEREVEAQDKMITNLKKKLKKK |